English
Yeast 豆瓣
作者: Feldmann, Horst 2010 - 1
“... This book provides the essentials in a simple and easy to understand way, suitable for use as a primer for researchers new to this highly studied microbe, especially if coming to yeast from another organism... very well referenced, providing both classic seminal studies as well as more recent publications, making it a useful text for those starting out in the field...” – Phenotype, 2010 Yeast is one of the oldest domesticated organisms and has both industrial and domestic applications. In addition, it is very widely used as a eukaryotic model organism in biological research and has offered valuable knowledge of genetics and basic cellular processes. In fact, studies in yeast have offered insight in mechanisms underlying ageing and diseases such as Alzheimers, Parkinsons and cancer. Yeast is also widely used in the lab as a tool for many technologies such as two-hybrid analysis, high throughput protein purification and localization and gene expression profiling. The broad range of uses and applications of this organism undoubtedly shows that it is invalubale in research, technology and industry. This book is an up-to date resource providing a comprehensive account of yeast biology and its use as a tool and model organism for understanding cellular and molecular processes of eukaryotes. Topics covered range from the fundamentals of yeast biology such as cell structure, biochemistry, genetics and signaling, to current approaches and applications such as metabolomics, disease models and uses in biotechnology. Written by a top expert in the field, this book offers an invaluable companion to beginners and experts in yeast research.
2018年4月6日 已读
有调理的编辑和适度的细节(以便在不需要的时候跳过),加上足够精细的引文归纳。好看。读完之后终于可以回到本科时候郑重地告诉年轻时的自己:做生物的用的乱七八糟缩写多真不是故意的,细节太多全写全称真的可以去死了(
English 专业书
The Body in the Library 豆瓣
作者: [英] 阿加莎·克里斯蒂 New Amer Library 2000 - 1
A beautiful, but dead, blonde is discovered in the library of Gossington Hall. And only Miss Marple can read the clues to find the killer.
Numsense! 豆瓣
作者: Annalyn Ng / Kenneth Soo 2017
2018年3月28日 已读
简明。当不去关心实现细节的时候,这种提纲挈领类型的描述可能更有帮助。
English 专业书
Protein Engineering Handbook 豆瓣
作者: Lutz, Stefan/ Bornscheuer, Uwe Theo BERTRAMS 2009 - 1
Unparalleled in size and scope, this new major reference integrates academic and industrial knowledge into a single resource, allowing for a unique overview of the entire field. Adopting a systematic and practice-oriented approach, and including a wide range of technical and methodological information, this highly accessible handbook is an invaluable 'toolbox' for any bioengineer. In two massive volumes, it covers the full spectrum of current concepts, methods and application areas.
2018年3月16日 已读
翻完了。非常精彩可圈可点。作为工具书来说挺不错的了。不过没有机器学习也没有crispr,这书距离被束之高阁默默积灰可能也不远了——
English 专业书
Synthetic Biology 豆瓣
作者: Zhao, Huimin 编 Academic Press 2013 - 6
Synthetic Biology provides a framework to examine key enabling components in the emerging area of synthetic biology. Chapters contributed by leaders in the field address tools and methodologies developed for engineering biological systems at many levels, including molecular, pathway, network, whole cell, and multi-cell levels. The book highlights exciting practical applications of synthetic biology such as microbial production of biofuels and drugs, artificial cells, synthetic viruses, and artificial photosynthesis. The roles of computers and computational design are discussed, as well as future prospects in the field, including cell-free synthetic biology and engineering synthetic ecosystems. Synthetic biology is the design and construction of new biological entities, such as enzymes, genetic circuits, and cells, or the redesign of existing biological systems. It builds on the advances in molecular, cell, and systems biology and seeks to transform biology in the same way that synthesis transformed chemistry and integrated circuit design transformed computing. The element that distinguishes synthetic biology from traditional molecular and cellular biology is the focus on the design and construction of core components that can be modeled, understood, and tuned to meet specific performance criteria and the assembly of these smaller parts and devices into larger integrated systems that solve specific biotechnology problems. It includes contributions from leaders in the field presents examples of ambitious synthetic biology efforts including creation of artificial cells from scratch, cell-free synthesis of chemicals, fuels, and proteins, engineering of artificial photosynthesis for biofuels production, and creation of unnatural living organisms. It describes the latest state-of-the-art tools developed for low-cost synthesis of ever-increasing sizes of DNA and efficient modification of proteins, pathways, and genomes. It highlights key technologies for analyzing biological systems at the genomic, proteomic, and metabolomic levels which are especially valuable in pathway, whole cell, and multi-cell applications. It details mathematical modeling tools and computational tools which can dramatically increase the speed of the design process as well as reduce the cost of development.
2018年2月20日 已读
全彩可能是最大亮点了——编得还好吧,但实在是不合我的胃口(前四章罗列工具原理和特色的还不错)。果然对稍微engineering一点的(利用机理而非发现机理)的内容就提不起兴趣(是病得治)。
English 专业书
Landmarks in Gene Regulation 豆瓣
作者: David S. Latchman Portland Press 1997 - 7
2018年2月13日 已读
基因调控的经典文献选编(主要是上世纪80-90年代)。每个topic有1-2篇文献,并有很好的导读。比起课本更清晰地阐明一些很基本的调控机理;很棒。入门的优质参考书。
English 专业书
Molecular Genetics 豆瓣
作者: Gunther S. Stent / Richard Calendar W.H.Freeman & Co Ltd; 2nd Revised edition edition 1978 - 9
2018年2月12日 已读
流畅的遗传和分子重要实验/发现的总结,写得很通俗。越读越被老一辈分子生物学家们的智慧所折服。超级精彩的解谜,当作悬疑来看也未尝不可。很难想象距离这本书出版才40年,而里面的发现已经是家喻户晓,展望部分的很多问题已经(正在)被解决。总觉得生化vs遗传/分子就像布局/逻辑流vs诡计流——
English 专业书 历史
Pep Guardiola 豆瓣
作者: Balague, Guillem
2018年1月4日 已读
2016增补版,加入了拜仁三年和曼城部分。挺好读的,比较开心能看到瓜自己人格上的发展。new role model get!
English 传记 体育 哲学
Synthetic Aesthetics 豆瓣
作者: Alexandra Daisy Ginsberg / Jane Calvert The MIT Press 2014 - 2
As synthetic biology transforms living matter into a medium for making, what is the role of design and its associated values?
Synthetic biology manipulates the stuff of life. For synthetic biologists, living matter is programmable material. In search of carbon-neutral fuels, sustainable manufacturing techniques, and innovative drugs, these researchers aim to redesign existing organisms and even construct completely novel biological entities. Some synthetic biologists see themselves as designers, inventing new products and applications. But if biology is viewed as a malleable, engineerable, designable medium, what is the role of design and how will its values apply?
Review
Far from an ivory tower text, Synthetic Aesthetics is a true collaboration between scientists, designers and thinkers who cross borders and disciplines to test the limits of biology in the digital world. Can bacteria be programmed to alert you when you're ill? Will we one day devise a synthetic organism that can suck up pollution in the wild? Is it possible to decentralise the petrochemical industry and distribute production and power? How long until machines take on lives of their own? Sooner than most of us imagine, it seems. By joining forces, the authors are able to bring disparate theories into the world, closer to life and into language even the laymen can understand.—Wallpaper—
Synthetic Aesthetics…is a freewheeling book with 20 authors and may irritate conventional scientists—some of the ideas were dreamed up while 'performing a dance based on the myth of the Golem', for example. But it certainly explains the key ideas of the field and leads you to many lateral conversations about what it may become. In the first few chapters, one central concern is what is meant by 'design'. An engineer might think of designing a bridge to a particular specification; a synthetic biologist of designing a microorganism with a new commercial application, pumping out green gasoline for example; but a real designer, a fashion designer, for example, is doing something else. As artist Daisy Ginsberg puts it, design 'is about possibility', the unimagined things that life could be. Synthetic biology, she writes, has been addressing 'humanity's needs'—limitless fuel, for example—rather than 'our needs as individual, diverse and complex humans'. This is refreshing: worries about the separation between the top-down design of the future and those who must live with the designs are quite rare in science.
—New Scientist—
Synthetic Aesthetics is wise in not attempting a comprehensive survey of this fast changing and much contested industry, but by taking a collaborative approach that attempts to integrate design based questioning with scientific practice, it provides lots of juicy clues about where we could be headed.
—PostMatter—
Review
Just as post-war designers Ray and Charles Eames showed us how molded plywood techniques for building airplane wings could result in unexpected, and now timeless, pieces of furniture, artists and designers like Daisy Ginsberg are showing us how bacteria and other biological building blocks may give us entree to an entirely new species of experiences.
―John Maeda, Design Partner, Kleiner Perkins Caufield & Byers
2017年12月2日 已读
这才叫“好,书”!世界观又被分解重构了一次。生物学家,社会学家,艺术家,哲学家的各种碰撞真是炸裂!开放结局(雾)炸裂!坚定了我的信念:科学本身应该被作为艺术来对待,而不是作为技术。读这本书让我感受到了最开始选择科学最根源的那种快乐——关键词:Design (人文), evolution(自然), creativity(艺术), future(形而上).
English 哲学
Sad Cypress 豆瓣
作者: Agatha Christie Berkley 1986 - 9
As a condemned murderess stands before the court, her eyes meet those of the only man who believes in her innocence. But Hercule Poirot must prove it before it's too late.
2017年11月30日 已读
论剧情人设动机是阿婆惯常套路,法庭推理简洁有力非常清新。波洛这种从人间观察出发的推理方式太棒。当然这本拿去当爱情小说也丝毫不差,甚至感觉凄美(我的少女心——
English 推理 阿加莎·克里斯蒂
Structural Genomics 豆瓣
作者: Chen, Yu Wai Springer 2014
2017年11月20日 已读
虽然能看出系统性,但是只看见了大量的结构生物学实验技术。。。Bioinfo方面只是推了几个server和数据库,说好的genomics呢。。。很多protocol们的introduction写得也不是特别好,失望。。。
English 专业书
Introduction to Genomics 豆瓣
作者: Lesk, Arthur M. 2012 - 4
Our genome is the blueprint to our existence: it encodes all the information we need to develop from a single cell into a hugely complicated functional organism. But it is more than a static information store: our genome is a dynamic, tightly-regulated collection of genes, which switch on and off in many combinations to give the variety of cells from which our bodies are formed. But how do we identify the genes that make up our genome? How do we determine their function? And how do different genes form the regulatory networks that direct the processes of life? Introduction to Genomics is a fascinating insight into what can be revealed from the study of genomes: how organisms differ or match; how different organisms evolved; how the genome is constructed and how it operates; and what our understanding of genomics means in terms of our future health and wellbeing. Covering the latest techniques that enable us to study the genome in ever-increasing detail, the book explores what the genome tells us about life at the level of the molecule, the cell, and the organism. Learning features throughout make this book the ideal teaching and learning tool: extensive end of chapter exercises and problems help the student to fully grasp the concepts being presented, while end of chapter weblems (web-based problems) and lab assignments give the student the opportunity to engage with the subject in a hands-on manner. The field of genomics is enabling us to analyze life in more detail than ever before; Introduction to Genomics is the perfect guide to this enthralling subject. Online Resource Centre The Online Resource Centre to accompany Introduction to Genomics features For lecturers: Figures from the book in electronic format For students: Answers to end-of-chapter exercises Guided tour of web sites in genomics Hints to end-of-chapter problems Rotating figures
2017年11月15日 已读
超精彩!level算是本科吧,但是对我这样的组学和遗传白痴来说读得超开心。关键概念清晰,例子非常有趣,语言生动。蓝玫瑰的培育令人印象深刻,巧妙融合了调控,代谢,基因工程的各种应用——当然还有美妙的产品!
English 专业书
Comparative Genomics 豆瓣
作者: Nadeau, Joseph H.; Sankoff, David; Nadeau, J. H. 2000 - 9
A comprehensive account of genomic rearrangement, focusing on the mechanisms of inversion, translocation, gene and genome duplication and gene transfer and on the patterns that result from them in comparative maps. Includes analyses of genomic sequences in organelles, prokaryotes and eukaryotes as well as comparative maps of the nuclear genomes in higher plants and animals. The book showcases a variety of algorithmic and statistical approaches to rearrangement and map data.
2017年11月10日 已读
我越来越中意这个系列的书了。虽然有一半多并读不懂,但是整本书编辑的逻辑非常清晰,从分子到基因到原核到动植物到进化,很漂亮!内容上建模和描述平衡得也很好——读完之后找到了下一步恶补的方向。。。
English 专业书
Directed Evolution Library Creation 豆瓣
作者: Georgiou, George 编 Humana Pr Inc
A comprehensive compendium of cutting-edge protocols for the generation of molecular diversity. Described in step-by-step detail to ensure experimental success, these protocols include readily reproducible methods for random mutagenesis of entire genes or segments of genes, for homologous and nonhomologus recombination, and for constructing in vivo libraries in bacteria and yeast. In addition to the various protocols for creating libraries, this volume also describes ways to analyze libraries, particularly those made by recombination. An accompanying volume, Directed Enzyme Evolution: Screening and Selection Methods (ISBN: 1-58829-286-X), is devoted entirely to selection and screening methods that can be applied to the directed evolution of enzymes. Copy for Both VolumesDirected Evolution Library Creation: Methods and Protocols and Directed Enzyme Evolution: Screening and Selection Methods constitute an extraordinary collection of all the key methods used today for directed evolution research. Described in step-by-step detail to ensure robust experimental results, these methods will enable both newcomers and more experienced investigators to design and implement directed evolution strategies for the engineering of novel proteins. The first volume describes methods for the creation of mutated DNA molecules, or DNA libraries, encoding variants of desired proteins. The second volume describes methods for screening DNA libraries to isolate mutant proteins that exhibit a specified function.
2017年10月30日 已读
不仅内容丰富有趣,而且章节编辑得非常系统,从点突到shuffling到fusion chimera很漂亮。
English 专业书
Guide to Yeast Genetics and Molecular Cell Biology 豆瓣
作者: Guthrie, Christine (EDT)/ Fink, Gerald R. (EDT) Lightning Source Inc 2002 - 6
This volume and its companion, Volume 351, are specifically designed to meet the needs of graduate students and postdoctoral students as well as researchers, by providing all the up-to-date methods necessary to study genes in yeast. Procedures are included that enable newcomers to set up a yeast laboratory and to master basic manipulations. Relevant background and reference information given for procedures can be used as a guide to developing protocols in a number of disciplines. Specific topics addressed in this book include basic techniques, making mutants, genomics, and proteomics.
2017年10月27日 已读
很快地扫读了一遍,还是有很多有用的信息的。不过有生物protocol类书籍的通病就是非常不系统——
English 专业书
The Da Vinci Code 豆瓣
作者: Dan Brown Random House Inc. 2004 - 3
Robert Langdon, Harvard Professor of symbology, receives an urgent late-night call while in Paris: the curator of the Louvre has been murdered. Alongside the body is a series of baffling ciphers. Langdon and a gifted French cryptologist, Sophie Neveu, are stunned to find a trail that leads to the works of Da Vinci – and further. The curator, part of a secret society named the Priory of Sion, may have sacrificed his life to keep secret the location of a vastly important religious relic hidden for centuries. It appears that the clandestine Vatican-sanctioned Catholic sect Opus Dei has now made its move. Unless Landon and Neveu can decipher the labyrinthine code and quickly assemble the pieces of the puzzle, the Priory’s secret – and a stunning historical truth – will be lost forever.
2017年9月15日 已读
plot很赞,故事讲的极好。然而解谜的部分有点弱智;动机感觉也非常不服气。。。四星吧——
DanBrown English 悬疑
Music At Your Fingertips 豆瓣
作者: Ruth Slenczynska Da Capo Press 1976 - 3
Intended for the aspiring artist as well as the enthusiastic amateur, this invaluable guide to piano practice and performance covers every major aspect of pianistic technique. Drawing from more than forty years experience as a teacher and highly acclaimed performer—as well as from her studies with Rachmaninoff, Schnabel, and Cortot—Slenczynska clearly demonstrates such basics as the proper use of hand positions, fingering, pedaling, ornamentation, various fingering touches, and counting. She also gives detailed instructions on the art of program building, carefully analyzing the concert programs of Horowitz, Rubinstein, and Serkin and pointing out the strengths and weaknesses of their program construction. She includes repertoire lists for performance at various levels of ability, a complete chart of ornament interpretation, and authoritative advice on posture, sight-reading, rhythm, note-learning, and memorization. Her book is essential reading for all who enjoy in the piano-beginners, serious students, teachers, and listeners.
2017年9月5日 已读
很棒。一些看似浅显却富有哲学性质的讨论不仅适用于其他乐器,甚至是有艺术气息的其他行业(比如科学),值得回味。读完之后对音乐家们的敬仰更进一步。
English 哲学 音乐
Python Machine Learning 豆瓣
作者: Sebastian Raschka Packt Publishing - ebooks Account 2015 - 9
About This Book
Leverage Python' s most powerful open-source libraries for deep learning, data wrangling, and data visualization
Learn effective strategies and best practices to improve and optimize machine learning systems and algorithms
Ask – and answer – tough questions of your data with robust statistical models, built for a range of datasets
Who This Book Is For
If you want to find out how to use Python to start answering critical questions of your data, pick up Python Machine Learning – whether you want to get started from scratch or want to extend your data science knowledge, this is an essential and unmissable resource.
What You Will Learn
Explore how to use different machine learning models to ask different questions of your data
Learn how to build neural networks using Keras and Theano
Find out how to write clean and elegant Python code that will optimize the strength of your algorithms
Discover how to embed your machine learning model in a web application for increased accessibility
Predict continuous target outcomes using regression analysis
Uncover hidden patterns and structures in data with clustering
Organize data using effective pre-processing techniques
Get to grips with sentiment analysis to delve deeper into textual and social media data
Style and approach
Python Machine Learning connects the fundamental theoretical principles behind machine learning to their practical application in a way that focuses you on asking and answering the right questions. It walks you through the key elements of Python and its powerful machine learning libraries, while demonstrating how to get to grips with a range of statistical models.
2017年8月21日 已读
嘴上说着不要还是勉强翻完了。很失望,大段代码和前后不搭的实例缺少完善的理论框架而且不系统,编写太随意难得要领。不过还是姑且有些有用内容,不算太亏。
English 专业书
An Introduction to Statistical Learning 豆瓣 Goodreads
9.8 (12 个评分) 作者: Gareth James / Daniela Witten Springer 2013 - 8
An Introduction to Statistical Learning provides an accessible overview of the field of statistical learning, an essential toolset for making sense of the vast and complex data sets that have emerged in fields ranging from biology to finance to marketing to astrophysics in the past twenty years. This book presents some of the most important modeling and prediction techniques, along with relevant applications. Topics include linear regression, classification, resampling methods, shrinkage approaches, tree-based methods, support vector machines, clustering, and more. Color graphics and real-world examples are used to illustrate the methods presented. Since the goal of this textbook is to facilitate the use of these statistical learning techniques by practitioners in science, industry, and other fields, each chapter contains a tutorial on implementing the analyses and methods presented in R, an extremely popular open source statistical software platform. Two of the authors co-wrote The Elements of Statistical Learning (Hastie, Tibshirani and Friedman, 2nd edition 2009), a popular reference book for statistics and machine learning researchers. An Introduction to Statistical Learning covers many of the same topics, but at a level accessible to a much broader audience. This book is targeted at statisticians and non-statisticians alike who wish to use cutting-edge statistical learning techniques to analyze their data. The text assumes only a previous course in linear regression and no knowledge of matrix algebra.
2017年7月26日 已读
作为入门教材真的太棒了。例子比较多,讲解非常深入浅出。不过习题和lab session偷懒没做,不想碰R(被拖走——
English 专业书